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RNAi Experiment: Cenix:311-f2 Ace View of Cenix:311-f2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T26A5.8
Description of "T26A5.8"  Associated GO Term : DNA binding
KOG Annotation  DNA polymerase epsilon, subunit D
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:6462234..6462974)
Transcript overlap: 454 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 391
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.748
Wormbase (BLAST) RNAi primary
External "T26A5.8" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  T26A5.9 (dlc-1)
Description of "T26A5.9"  dlc-1 encodes a dynein light chain type 1 that affects pronuclear migrations and thus affects embryonic viability; also affects fertility, body wall morphology and integrity.
KOG Annotation  Dynein light chain type 1
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (III:6462234..6462974)
Transcript overlap: 133 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 132
Relative score: 0.338 (Best raw score= for Gene )
Specificity index: 0.252
External "T26A5.9" Links  Wormbase NCBI Phenobank 1
Cenix:311-f2 Phenotypes Help with Phenotypes
Phenotype  Pnm
WT_postembryonic_morphology
External Movies 
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hosting these data.)
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Cenix:311-f2 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:311-f2 (PCR_reagent)
Remark  early embryonic: Pronuclear Migration
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of T26A5.9 Browse using GBrowse
Gene Graph
Gene Plot of T26A5.8 Browse using GBrowse
Gene Graph