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RNAi Experiment: Cenix:312-b11 Ace View of Cenix:312-b11
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C03B8.2
KOG Annotation  G2/Mitotic-specific cyclin A
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (III:7715864..7716520)
Transcript overlap: 180 nt
Explain types of evidence for RNAi inhibition
External "C03B8.2" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  ZK1225.7
Evidence for Inhibition 
Sliding Window Raw score: 297
Relative score: 0.637 (Best raw score= for Gene )
Specificity index: 0.351
Wormbase (BLAST) RNAi primary
External "ZK1225.7" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  T07F10.5
KOG Annotation  G2/Mitotic-specific cyclin A
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 83
Relative score: 0.178 (Best raw score= for Gene )
Specificity index: 0.098
External "T07F10.5" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F27D4.3
Evidence for Inhibition 
Sliding Window Raw score: 466
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.551
Wormbase (BLAST) RNAi primary
External "F27D4.3" Links  Wormbase NCBI Phenobank 1
Cenix:312-b11 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:312-b11 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:312-b11 (PCR_reagent)
Remark  wild type
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of C03B8.2 Browse using GBrowse
Gene Graph
Gene Plot of ZK1225.7 Browse using GBrowse
Gene Graph
Gene Plot of F27D4.3 Browse using GBrowse
Gene Graph
Gene Plot of T07F10.5 Browse using GBrowse
Gene Graph