Link to H04D03.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y37D8A.12a.1Link to W03G9.3Link to K01G5.3Link to C38D4.1aLink to Y37D8A.12bLink to Y37D8A.12a.2Link to C38D4.1bLink to W05F2.2geneMap Link to Y67D8C.4Link to Y67D8C.3b.2Link to Y67D8C.3aRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to W03G9.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to H04D03.1Link to Y37D8A.12a.1Link to K01G5.3Link to C38D4.1aLink to C38D4.1bLink to W05F2.2Link to Y37D8A.12a.2Link to Y37D8A.12bgeneMap Link to C38D4.1aLink to C38D4.1bRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y37D8A.12a.1Link to W03G9.3Link to K01G5.3Link to Y37D8A.12a.2Link to W05F2.2Link to Y37D8A.12bLink to H04D03.1geneMap Link to W05F2.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to W03G9.3Link to K01G5.3Link to C38D4.1aLink to Y37D8A.12a.2Link to Y37D8A.12a.1Link to H04D03.1Link to C38D4.1bLink to Y37D8A.12bgeneMap Link to Y37D8A.12a.1Link to Y37D8A.12a.2Link to Y37D8A.12bRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to H04D03.1Link to W03G9.3Link to C38D4.1aLink to C38D4.1bLink to W05F2.2Link to K01G5.3geneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Cenix:320-e10 Ace View of Cenix:320-e10
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  H04D03.1
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:10436342..10437494)
Transcript overlap: 832 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 748
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.351
Wormbase (BLAST) RNAi primary
External "H04D03.1" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  Y67D8C.4
Evidence for Inhibition 
Sliding Window Raw score: 94
Relative score: 0.126 (Best raw score= for Gene )
Specificity index: 0.044
External "Y67D8C.4" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  W03G9.3
Evidence for Inhibition 
Sliding Window Raw score: 364
Relative score: 0.487 (Best raw score= for Gene )
Specificity index: 0.171
Wormbase (BLAST) RNAi primary
External "W03G9.3" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  C38D4.1
Evidence for Inhibition 
Sliding Window Raw score: 271
Relative score: 0.362 (Best raw score= for Gene )
Specificity index: 0.127
Wormbase (BLAST) RNAi primary
External "C38D4.1" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  W05F2.2
Evidence for Inhibition 
Sliding Window Raw score: 280
Relative score: 0.374 (Best raw score= for Gene )
Specificity index: 0.132
Wormbase (BLAST) RNAi primary
External "W05F2.2" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  Y37D8A.12
Evidence for Inhibition 
Sliding Window Raw score: 372
Relative score: 0.497 (Best raw score= for Gene )
Specificity index: 0.175
Wormbase (BLAST) RNAi primary
External "Y37D8A.12" Links  Wormbase NCBI Phenobank 1
Cenix:320-e10 Phenotypes Help with Phenotypes
Phenotype  WT
External Movies 
(Please note that RNAiDB is not
hosting these data.)
/static/images/movie.gif /static/images/movie.gif /static/images/movie.gif
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Cenix:320-e10 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:320-e10 (PCR_reagent)
Remark  wild type
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y67D8C.4 Browse using GBrowse
Gene Graph
Gene Plot of C38D4.1 Browse using GBrowse
Gene Graph
Gene Plot of W03G9.3 Browse using GBrowse
Gene Graph
Gene Plot of H04D03.1 Browse using GBrowse
Gene Graph
Gene Plot of W05F2.2 Browse using GBrowse
Gene Graph
Gene Plot of Y37D8A.12 Browse using GBrowse
Gene Graph