Link to Y76A2A.1Link to T27E9.7.1Link to T27E9.7.2Link to T27E9.2.1Link to T27E9.2.2Link to T27E9.1a.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to T27E9.2.1Link to T27E9.7.2Link to T27E9.7.1geneMap Link to T27E9.7.1Link to T27E9.7.2Link to Y76A2A.1Link to T27E9.2.1Link to T27E9.2.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to T27E9.2.1Link to T27E9.7.2Link to T27E9.7.1geneMap Link to Y76A2A.1RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: Cenix:321-b7 Ace View of Cenix:321-b7
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T27E9.2
Description of "T27E9.2"  Associated GO Term : ubiquinol-cytochrome-c reductase activity
KOG Annotation  Ubiquinol-cytochrome c reductase hinge protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top85_percentile_ePCR (III:13460014..13461575)
Transcript overlap: 1147 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 1126
Relative score: 0.876 (Best raw score= for Gene )
Specificity index: 0.467
External "T27E9.2" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  T27E9.7
Description of "T27E9.7"  Associated GO Term : nucleotide binding
KOG Annotation  Predicted transporter (ABC superfamily)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:13460014..13461575)
Transcript overlap: 1306 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 1285
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.533
Wormbase (BLAST) RNAi primary
External "T27E9.7" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  Y76A2A.1 (tag-164)
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (III:13460014..13461575)
Transcript overlap: 111 nt
Explain types of evidence for RNAi inhibition
Wormbase (BLAST) RNAi primary
External "Y76A2A.1" Links  Wormbase NCBI Phenobank 1 2
Cenix:321-b7 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:321-b7 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:321-b7 (PCR_reagent)
Remark  wild type
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y76A2A.1 Browse using GBrowse
Gene Graph
Gene Plot of T27E9.2 Browse using GBrowse
Gene Graph
Gene Plot of T27E9.7 Browse using GBrowse
Gene Graph