Link to C38C10.3Link to C38C10.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
RNAi Experiment: Cenix:322-b8 Ace View of Cenix:322-b8
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C38C10.1 (tkr-1)
Description of "C38C10.1"  tkr-1 encodes a G protein-coupled receptor that is the C. elegans tachykinin-like neuropeptide receptor homolog; by homology, TKR-1 is predicted to function in modulation of excitatory neurotransmission; as loss of tkr-1 activity via RNAi results in moderate reduction of fat content, TKR-1 may play a specific role in regulating lipid metabolism; a tkr-1 reporter gene fusion is reportedly expressed in the socket cells of the deirid and post-deirid sensilla from the L2 larval stage through adulthood.
KOG Annotation  G protein-coupled receptor
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:9385735..9387231)
Transcript overlap: 852 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 726
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C38C10.1" Links  Wormbase NCBI Phenobank 1
Cenix:322-b8 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:322-b8 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:322-b8 (PCR_reagent)
Remark  early embryonic: No significant defects.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of C38C10.1 Browse using GBrowse
Gene Graph