Link to C36A4.2RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F42A6.4RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to C36A4.6geneMap Link to C36A4.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to C36A4.6RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F42A6.4geneMap RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to C36A4.2Link to C36A4.1Link to K06B9.1geneMap
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RNAi Experiment: Cenix:322-g7 Ace View of Cenix:322-g7
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C36A4.2 (cyp-25A2)
Description of "C36A4.2"  Associated GO Term : monooxygenase activity
KOG Annotation  Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:3835624..3837209)
Transcript overlap: 1176 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 1029
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.55
External "C36A4.2" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F42A6.4 (cyp-25A5)
Description of "F42A6.4"  Associated GO Term : monooxygenase activity
KOG Annotation  Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 84
Relative score: 0.082 (Best raw score= for Gene )
Specificity index: 0.045
Wormbase (BLAST) RNAi primary
External "F42A6.4" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  C36A4.1 (cyp-25A1)
Description of "C36A4.1"  Associated GO Term : monooxygenase activity
KOG Annotation  Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 447
Relative score: 0.434 (Best raw score= for Gene )
Specificity index: 0.239
External "C36A4.1" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  C36A4.6 (cyp-25A4)
Description of "C36A4.6"  Associated GO Term : monooxygenase activity
KOG Annotation  Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 111
Relative score: 0.108 (Best raw score= for Gene )
Specificity index: 0.059
External "C36A4.6" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  C36A4.3 (cyp-25A3)
Evidence for Inhibition 
Sliding Window Raw score: 199
Relative score: 0.193 (Best raw score= for Gene )
Specificity index: 0.106
Wormbase (BLAST) RNAi primary
External "C36A4.3" Links  Wormbase NCBI Phenobank 1
Cenix:322-g7 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:322-g7 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:322-g7 (PCR_reagent)
Remark  wild type
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F42A6.4 Browse using GBrowse
Gene Graph
Gene Plot of C36A4.2 Browse using GBrowse
Gene Graph
Gene Plot of C36A4.1 Browse using GBrowse
Gene Graph
Gene Plot of C36A4.6 Browse using GBrowse
Gene Graph
Gene Plot of C36A4.3 Browse using GBrowse
Gene Graph