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RNAi Experiment: Cenix:322-h7 Ace View of Cenix:322-h7
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C36A4.6 (cyp-25A4)
Description of "C36A4.6"  Associated GO Term : monooxygenase activity
KOG Annotation  Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:3850114..3851516)
Transcript overlap: 961 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 600
Relative score: 0.737 (Best raw score= for Gene )
Specificity index: 0.424
External "C36A4.6" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  F42A6.4 (cyp-25A5)
Description of "F42A6.4"  Associated GO Term : monooxygenase activity
KOG Annotation  Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (IV:3327707..3329106)
Transcript overlap: 961 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 814
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.576
Wormbase (BLAST) RNAi primary
External "F42A6.4" Links  Wormbase NCBI Phenobank 1 2
Cenix:322-h7 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:322-h7 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:322-h7 (PCR_reagent)
Remark  wild type
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F42A6.4 Browse using GBrowse
Gene Graph
Gene Plot of C36A4.6 Browse using GBrowse
Gene Graph