Link to R17.1RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Cenix:324-g11 Ace View of Cenix:324-g11
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  R17.1
Description of "R17.1"  This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function.
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:10847138..10848814)
Transcript overlap: 861 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 819
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.848
Wormbase (BLAST) RNAi primary
External "R17.1" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F25B4.3
Evidence for Inhibition 
Sliding Window Raw score: 70
Relative score: 0.085 (Best raw score= for Gene )
Specificity index: 0.072
External "F25B4.3" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  Y60A3A.11
Evidence for Inhibition 
Sliding Window Raw score: 77
Relative score: 0.094 (Best raw score= for Gene )
Specificity index: 0.08
External "Y60A3A.11" Links  Wormbase NCBI Phenobank 1
Cenix:324-g11 Phenotypes Help with Phenotypes
Phenotype  WT
External Movies 
(Please note that RNAiDB is not
hosting these data.)
/static/images/movie.gif /static/images/movie.gif /static/images/movie.gif
Help
Cenix:324-g11 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:324-g11 (PCR_reagent)
Remark  early embryonic: 1/5 embryos has a polar body resorbed in AB, otherwise wildtype results.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of R17.1 Browse using GBrowse
Gene Graph
Gene Plot of F25B4.3 Browse using GBrowse
Gene Graph
Gene Plot of Y60A3A.11 Browse using GBrowse
Gene Graph