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RNAi Experiment: Cenix:324-g11 Ace View of Cenix:324-g11
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  R17.1
Description of "R17.1"  This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function.
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:10847138..10848814)
Transcript overlap: 861 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 819
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.848
Wormbase (BLAST) RNAi primary
External "R17.1" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F25B4.3
Evidence for Inhibition 
Sliding Window Raw score: 70
Relative score: 0.085 (Best raw score= for Gene )
Specificity index: 0.072
External "F25B4.3" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  Y60A3A.11
Evidence for Inhibition 
Sliding Window Raw score: 77
Relative score: 0.094 (Best raw score= for Gene )
Specificity index: 0.08
External "Y60A3A.11" Links  Wormbase NCBI Phenobank 1
Cenix:324-g11 Phenotypes Help with Phenotypes
Phenotype  WT
External Movies 
(Please note that RNAiDB is not
hosting these data.)
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Cenix:324-g11 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:324-g11 (PCR_reagent)
Remark  early embryonic: 1/5 embryos has a polar body resorbed in AB, otherwise wildtype results.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of R17.1 Browse using GBrowse
Gene Graph
Gene Plot of F25B4.3 Browse using GBrowse
Gene Graph
Gene Plot of Y60A3A.11 Browse using GBrowse
Gene Graph