Link to Y37D8A.21.1Link to Y37D8A.21.2Link to Y37D8A.19.2Link to Y37D8A.19.1Link to Y37D8A.22Link to Y37D8A.23cLink to Y37D8A.23bLink to Y37D8A.23aLink to Y39E4A.1Link to Y39E4A.2bLink to Y39E4A.2aRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to Y37D8A.18Link to Y37D8A.21.1Link to Y37D8A.21.2Link to Y37D8A.19.1Link to Y37D8A.19.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F59E11.2RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Cenix:326-f9 Ace View of Cenix:326-f9
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y37D8A.19
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:12929213..12931215)
Transcript overlap: 360 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 276
Relative score: 0.433 (Best raw score= for Gene )
Specificity index: 0.243
Wormbase (BLAST) RNAi primary
External "Y37D8A.19" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  Y37D8A.21
Description of "Y37D8A.21"  Associated GO Term : nucleotide binding
KOG Annotation  RNA binding protein (RRM superfamily)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (III:12929213..12931215)
Transcript overlap: 248 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 169
Relative score: 0.347 (Best raw score= for Gene )
Specificity index: 0.195
Wormbase (BLAST) RNAi primary
External "Y37D8A.21" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  F59E11.3 (sri-23)
Evidence for Inhibition 
Sliding Window Raw score: 487
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.562
External "F59E11.3" Links  Wormbase NCBI Phenobank 1 2
Cenix:326-f9 Phenotypes Help with Phenotypes
Phenotype  WT
External Movies 
(Please note that RNAiDB is not
hosting these data.)
/static/images/movie.gif /static/images/movie.gif /static/images/movie.gif
Help
Cenix:326-f9 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:326-f9 (PCR_reagent)
Remark  wild type
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F59E11.3 Browse using GBrowse
Gene Graph
Gene Plot of Y37D8A.19 Browse using GBrowse
Gene Graph
Gene Plot of Y37D8A.21 Browse using GBrowse
Gene Graph