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RNAi Experiment: Cenix:328-c11 Ace View of Cenix:328-c11
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y39A3B.3
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:1984894..1986349)
Transcript overlap: 318 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 276
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.577
Wormbase (BLAST) RNAi primary
External "Y39A3B.3" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  T12C9.3 (twk-2)
Description of "T12C9.3"  twk-2 encodes one of 44 C. elegans TWK (two-P domain K+) potassium channel subunits that contain two pore-forming domains and four transmembrane domains; the precise role of TWK-2 in C. elegans development and/or behavior is not yet known, but TWK-2 may function redundantly with other TWK channels; TWK-2 is expressed in a subset of neurons.
KOG Annotation  Tandem pore domain K+ channel
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 202
Relative score: 0.732 (Best raw score= for Gene )
Specificity index: 0.423
External "T12C9.3" Links  Wormbase NCBI Phenobank 1
Cenix:328-c11 Phenotypes Help with Phenotypes
Phenotype  WT
External Movies 
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Cenix:328-c11 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:328-c11 (PCR_reagent)
Remark  wild type
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y39A3B.3 Browse using GBrowse
Gene Graph
Gene Plot of T12C9.3 Browse using GBrowse
Gene Graph