Link to T12B5.6RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi 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Y57E12AL.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi 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Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Cenix:328-d5 Ace View of Cenix:328-d5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T12B5.6
Description of "T12B5.6"  This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:933702..935193)
Transcript overlap: 1360 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 1276
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.253
Wormbase (BLAST) RNAi primary
External "T12B5.6" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  C29F9.11
Evidence for Inhibition 
Sliding Window Raw score: 129
Relative score: 0.101 (Best raw score= for Gene )
Specificity index: 0.026
External "C29F9.11" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F07G6.7
Evidence for Inhibition 
Sliding Window Raw score: 233
Relative score: 0.183 (Best raw score= for Gene )
Specificity index: 0.046
External "F07G6.7" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  Y57E12AL.3
Evidence for Inhibition 
Sliding Window Raw score: 642
Relative score: 0.503 (Best raw score= for Gene )
Specificity index: 0.127
External "Y57E12AL.3" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  T06A1.6
Evidence for Inhibition 
Sliding Window Raw score: 447
Relative score: 0.35 (Best raw score= for Gene )
Specificity index: 0.089
External "T06A1.6" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  C29F9.10
Evidence for Inhibition 
Sliding Window Raw score: 122
Relative score: 0.096 (Best raw score= for Gene )
Specificity index: 0.024
External "C29F9.10" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  D1054.4
Evidence for Inhibition 
Sliding Window Raw score: 601
Relative score: 0.471 (Best raw score= for Gene )
Specificity index: 0.119
External "D1054.4" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  H28G03.5
Evidence for Inhibition 
Sliding Window Raw score: 594
Relative score: 0.466 (Best raw score= for Gene )
Specificity index: 0.118
External "H28G03.5" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  B0280.6
Evidence for Inhibition 
Sliding Window Raw score: 347
Relative score: 0.272 (Best raw score= for Gene )
Specificity index: 0.069
External "B0280.6" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  Y68A4A.4
Evidence for Inhibition 
Sliding Window Raw score: 595
Relative score: 0.466 (Best raw score= for Gene )
Specificity index: 0.118
External "Y68A4A.4" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  T12B5.8
Description of "T12B5.8"  This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
Evidence for Inhibition 
Sliding Window Raw score: 64
Relative score: 0.05 (Best raw score= for Gene )
Specificity index: 0.013
External "T12B5.8" Links  Wormbase NCBI Phenobank 1
Cenix:328-d5 Phenotypes Help with Phenotypes
Cenix:328-d5 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:328-d5 (PCR_reagent)
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of C29F9.11 Browse using GBrowse
Gene Graph
Gene Plot of Y57E12AL.3 Browse using GBrowse
Gene Graph
Gene Plot of F07G6.7 Browse using GBrowse
Gene Graph
Gene Plot of C29F9.10 Browse using GBrowse
Gene Graph
Gene Plot of T06A1.6 Browse using GBrowse
Gene Graph
Gene Plot of T12B5.6 Browse using GBrowse
Gene Graph
Gene Plot of D1054.4 Browse using GBrowse
Gene Graph
Gene Plot of H28G03.5 Browse using GBrowse
Gene Graph
Gene Plot of B0280.6 Browse using GBrowse
Gene Graph
Gene Plot of Y68A4A.4 Browse using GBrowse
Gene Graph
Gene Plot of T12B5.8 Browse using GBrowse
Gene Graph