Link to K01G5.8a.2Link to K01G5.8a.1Link to K01G5.8bRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to K01G5.7.1Link to K01G5.7.2Link to K01G5.6RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to ZK154.3geneMap Link to F16H11.2RNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: Cenix:329-e9 Ace View of Cenix:329-e9
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  K01G5.8
KOG Annotation  Conserved alpha-helical protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:10740001..10740840)
Transcript overlap: 416 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 300
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.618
Wormbase (BLAST) RNAi primary
External "K01G5.8" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  K01G5.7 (tbb-1)
Description of "K01G5.7"  This gene encodes a homolog of mammalian beta-tubulin (TUBB) that is expressed at high levels in the germline; TBB-1 is redundant for embryonic viability, due to its paralog TBB-2.
KOG Annotation  Beta tubulin
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (III:10740001..10740840)
Transcript overlap: 90 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 69
Relative score: 0.258 (Best raw score= for Gene )
Specificity index: 0.16
External "K01G5.7" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  F16H11.2
Evidence for Inhibition 
Sliding Window Raw score: 96
Relative score: 0.36 (Best raw score= for Gene )
Specificity index: 0.222
External "F16H11.2" Links  Wormbase NCBI Phenobank 1 2
Cenix:329-e9 Phenotypes Help with Phenotypes
Phenotype  WT
External Movies 
(Please note that RNAiDB is not
hosting these data.)
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Cenix:329-e9 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:329-e9 (PCR_reagent)
Remark  wild type
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F16H11.2 Browse using GBrowse
Gene Graph
Gene Plot of K01G5.8 Browse using GBrowse
Gene Graph
Gene Plot of K01G5.7 Browse using GBrowse
Gene Graph