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RNAi Experiment: Cenix:329-g10 Ace View of Cenix:329-g10
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F35G12.11
Description of "F35G12.11"  Associated GO Term : molecular_function unknown
KOG Annotation  Enhancer of rudimentary
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:4592838..4593679)
Transcript overlap: 448 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 406
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.676
Wormbase (BLAST) RNAi primary
External "F35G12.11" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F35G12.8 (smc-4)
Description of "F35G12.8"  The smc-4 gene encodes a homolog of the SMC4 subunit of mitotic condensin; SMC-4 acts with MIX-1 to enable chromosome segregation.
KOG Annotation  Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (III:4592838..4593679)
Transcript overlap: 237 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 195
Relative score: 0.48 (Best raw score= for Gene )
Specificity index: 0.324
External "F35G12.8" Links  Wormbase NCBI Phenobank 1
Cenix:329-g10 Phenotypes Help with Phenotypes
Phenotype  Larval Lethal-Early (L1/L2)
External Movies 
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Cenix:329-g10 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:329-g10 (PCR_reagent)
Remark  post-embryonic: Larval Lethal-Early (L1/L2)
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F35G12.8 Browse using GBrowse
Gene Graph
Gene Plot of F35G12.11 Browse using GBrowse
Gene Graph