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RNAi Experiment: Cenix:33-c7 Ace View of Cenix:33-c7
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  B0513.2
KOG Annotation  Uncharacterized conserved protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:13882656..13884028)
Transcript overlap: 648 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 543
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "B0513.2" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  B0513.3 (rpl-29)
Description of "B0513.3"  rpl-29 encodes a large ribosomal subunit L29 protein; by homology, RPL-29 is predicted to function in protein biosynthesis; in C. elegans, loss of rpl-29 function via RNA-mediated interference (RNAi) does not result in any obvious abnormalities.
KOG Annotation  60S ribosomal protein L29
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 8 nt Explain types of evidence for RNAi inhibition
External "B0513.3" Links  Wormbase NCBI Phenobank 1 2
Cenix:33-c7 Phenotypes Help with Phenotypes
Phenotype  WT
External Movies 
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hosting these data.)
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Cenix:33-c7 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:33-c7 (PCR_reagent)
Remark  3/3 tests are wildtype.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of B0513.2 Browse using GBrowse
Gene Graph
Gene Plot of B0513.3 Browse using GBrowse
Gene Graph