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Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Cenix:33-e4 Ace View of Cenix:33-e4
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F20E11.14 (srh-161)
Evidence for Inhibition 
Sliding Window Raw score: 93
Relative score: 0.08 (Best raw score= for Gene )
Specificity index: 0.053
External "F20E11.14" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F40D4.4 (srh-162)
Evidence for Inhibition 
Sliding Window Raw score: 1158
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.654
Wormbase (BLAST) RNAi primary
External "F40D4.4" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F20E11.3 (srh-160)
Evidence for Inhibition 
Sliding Window Raw score: 77
Relative score: 0.066 (Best raw score= for Gene )
Specificity index: 0.044
Wormbase (BLAST) RNAi secondary
External "F20E11.3" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F20E11.13 (srh-158)
Evidence for Inhibition 
Sliding Window Raw score: 60
Relative score: 0.052 (Best raw score= for Gene )
Specificity index: 0.034
External "F20E11.13" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  T04B2.1
Evidence for Inhibition 
Sliding Window Raw score: 290
Relative score: 0.25 (Best raw score= for Gene )
Specificity index: 0.164
External "T04B2.1" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F40D4.3 (srh-159)
Description of "F40D4.3"  Associated GO Term : G-protein coupled receptor activity
Evidence for Inhibition 
Sliding Window Raw score: 92
Relative score: 0.079 (Best raw score= for Gene )
Specificity index: 0.052
Wormbase (BLAST) RNAi secondary
External "F40D4.3" Links  Wormbase NCBI Phenobank 1
Cenix:33-e4 Phenotypes Help with Phenotypes
Phenotype  WT
External Movies 
(Please note that RNAiDB is not
hosting these data.)
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Help
Cenix:33-e4 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:33-e4 (PCR_reagent)
Remark  Wildtype results in two independent experiments.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F20E11.14 Browse using GBrowse
Gene Graph
Gene Plot of F20E11.3 Browse using GBrowse
Gene Graph
Gene Plot of F40D4.4 Browse using GBrowse
Gene Graph
Gene Plot of F20E11.13 Browse using GBrowse
Gene Graph
Gene Plot of T04B2.1 Browse using GBrowse
Gene Graph
Gene Plot of F40D4.3 Browse using GBrowse
Gene Graph