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RNAi Experiment: Cenix:330-c11 Ace View of Cenix:330-c11
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F35G12.9 (apc-11)
Description of "F35G12.9"  apc-11 encodes a predicted key catalytic subunit of the anaphase promoting complex that is required for embryonic development past the embryonic one- cell stage.
KOG Annotation  Anaphase-promoting complex (APC), subunit 11
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:4593660..4594352)
Transcript overlap: 523 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 460
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.858
Wormbase (BLAST) RNAi primary
External "F35G12.9" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F35G12.11
Description of "F35G12.11"  Associated GO Term : molecular_function unknown
KOG Annotation  Enhancer of rudimentary
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (III:4593660..4594352)
Transcript overlap: 133 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 112
Relative score: 0.165 (Best raw score= for Gene )
Specificity index: 0.142
External "F35G12.11" Links  Wormbase NCBI Phenobank 1
Cenix:330-c11 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  Passage Through Meiosis defective
External Movies 
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hosting these data.)
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Cenix:330-c11 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:330-c11 (PCR_reagent)
Remark  early embryonic: Passage Through Meiosis
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F35G12.9 Browse using GBrowse
Gene Graph
Gene Plot of F35G12.11 Browse using GBrowse
Gene Graph