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RNAi Experiment: Cenix:330-g5 Ace View of Cenix:330-g5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y56A3A.1 (ntl-3)
Description of "Y56A3A.1"  ntl-3 is the ortholog of NOT3/NOT5, a member of a protein complex also predicted to contain ccf-1/Y56A3A.20 (CAF1/POP2); ntl-3 is required for embryonic viability in mass RNAi assays.
KOG Annotation  CCR4-NOT transcriptional regulation complex, NOT5 subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:11832044..11833774)
Transcript overlap: 626 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 585
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y56A3A.1" Links  Wormbase NCBI Phenobank 1
Cenix:330-g5 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  Cortical Dynamics abnormal
External Movies 
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Cenix:330-g5 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:330-g5 (PCR_reagent)
Remark  early embryonic: Cortical Dynamics
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y56A3A.1 Browse using GBrowse
Gene Graph