Link to F40F12.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to K03H1.3geneMap Link to F40F12.7.2Link to F40F12.7.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to K03H1.10.2Link to R10E11.1aLink to R10E11.1bLink to K03H1.10.1geneMap Link to K03H1.10.2Link to K03H1.10.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F40F12.7.1Link to F40F12.7.2Link to R10E11.1ageneMap Link to K03H1.4Link to K03H1.6RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to K03H1.3RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F40F12.1geneMap
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RNAi Experiment: Cenix:330-h6 Ace View of Cenix:330-h6
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F40F12.1 (sdz-17)
Description of "F40F12.1"  Associated GO Term : molecular_function unknown
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:9915520..9916516)
Transcript overlap: 332 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 269
Specificity index: 0.338
Wormbase (BLAST) RNAi primary
External "F40F12.1" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F40F12.7
Description of "F40F12.7"  Associated GO Term : transcription cofactor activity
KOG Annotation  CREB binding protein/P300 and related TAZ Zn-finger proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (III:9915520..9916516)
Transcript overlap: 143 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 122
Relative score: 0.368 (Best raw score= for Gene )
Specificity index: 0.124
External "F40F12.7" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  K03H1.10
Description of "K03H1.10"  Associated GO Term : transcription cofactor activity
KOG Annotation  CREB binding protein/P300 and related TAZ Zn-finger proteins
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 102
Relative score: 0.361 (Best raw score= for Gene )
Specificity index: 0.122
External "K03H1.10" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  K03H1.4
Description of "K03H1.4"  Associated GO Term : molecular_function unknown
Evidence for Inhibition 
Sliding Window Raw score: 63
Relative score: 0.234 (Best raw score= for Gene )
Specificity index: 0.079
External "K03H1.4" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  K03H1.3
Description of "K03H1.3"  Associated GO Term : molecular_function unknown
Evidence for Inhibition 
Sliding Window Raw score: 269
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.338
Wormbase (BLAST) RNAi primary
External "K03H1.3" Links  Wormbase NCBI Phenobank 1
Cenix:330-h6 Phenotypes Help with Phenotypes
Phenotype  WT
External Movies 
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Cenix:330-h6 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:330-h6 (PCR_reagent)
Remark  early embryonic: No significant defects.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of K03H1.10 Browse using GBrowse
Gene Graph
Gene Plot of K03H1.4 Browse using GBrowse
Gene Graph
Gene Plot of F40F12.7 Browse using GBrowse
Gene Graph
Gene Plot of F40F12.1 Browse using GBrowse
Gene Graph
Gene Plot of K03H1.3 Browse using GBrowse
Gene Graph