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RNAi Experiment: Cenix:331-b9 Ace View of Cenix:331-b9
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y49E10.14 (pie-1)
Description of "Y49E10.14"  pie-1 encodes a C-x8-C-x5-C-x3-H-type zinc-finger protein; maternally provided PIE-1 is essential for germline cell fate determination, as it functions as a repressor of RNA polymerase II-dependent gene expression in the developing germ line; PIE-1 localization, initially uniform and then concentrated in the posterior germ cell lineages, is regulated by other maternally supplied gene products including PAR-1, MEX-5, and MEX-6.
KOG Annotation  CCCH-type Zn-finger protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:12427319..12429018)
Transcript overlap: 609 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 546
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y49E10.14" Links  Wormbase NCBI Phenobank 1
Cenix:331-b9 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  WT_postembryonic_morphology
External Movies 
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Cenix:331-b9 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:331-b9 (PCR_reagent)
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y49E10.14 Browse using GBrowse
Gene Graph