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RNAi Experiment: Cenix:331-e8 Ace View of Cenix:331-e8
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y75B8A.7
KOG Annotation  U3 small nucleolar ribonucleoprotein (snoRNP) subunit - Mpp10p
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:12158471..12159790)
Transcript overlap: 787 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 745
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.913
Wormbase (BLAST) RNAi primary
External "Y75B8A.7" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  Y65B4A.8
Description of "Y65B4A.8"  Associated GO Term : nucleotidyltransferase activity
KOG Annotation  Predicted nucleotidyltransferase
Similar to bacterial dephospho-CoA kinase
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 71
Relative score: 0.095 (Best raw score= for Gene )
Specificity index: 0.087
External "Y65B4A.8" Links  Wormbase NCBI Phenobank 1
Cenix:331-e8 Phenotypes Help with Phenotypes
Phenotype  WT
External Movies 
(Please note that RNAiDB is not
hosting these data.)
/static/images/movie.gif /static/images/movie.gif /static/images/movie.gif
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Cenix:331-e8 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:331-e8 (PCR_reagent)
Remark  wild type
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y65B4A.8 Browse using GBrowse
Gene Graph
Gene Plot of Y75B8A.7 Browse using GBrowse
Gene Graph