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RNAi Experiment: Cenix:332-a8 Ace View of Cenix:332-a8
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y71H2B.10 (apb-1)
Description of "Y71H2B.10"  The apt-3 gene encodes an adaptin: specifically, it encodes an ortholog of the beta1/2 subunit of adaptor protein complex 1 (AP-1) that affects fertility and embryonic viability.
KOG Annotation  Vesicle coat complex AP-1/AP-2/AP-4, beta subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:2591189..2592520)
Transcript overlap: 430 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 388
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y71H2B.10" Links  Wormbase NCBI Phenobank 1
Cenix:332-a8 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  WT_postembryonic_morphology
External Movies 
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Cenix:332-a8 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:332-a8 (PCR_reagent)
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y71H2B.10 Browse using GBrowse
Gene Graph