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RNAi Experiment: Cenix:332-b5 Ace View of Cenix:332-b5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y56A3A.4 (taf-12)
Description of "Y56A3A.4"  taf-12 encodes a homolog of transcription initiation factor TFIID 20/15 kDa subunits (TAFII-20/TAFII-15) with a glutamine/asparagine-rich N-terminal domain and a a TFIID-like C-terminal domain.
KOG Annotation  Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:11864486..11865682)
Transcript overlap: 282 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 220
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y56A3A.4" Links  Wormbase NCBI Phenobank 1
Cenix:332-b5 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  WT_postembryonic_morphology
External Movies 
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Cenix:332-b5 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:332-b5 (PCR_reagent)
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y56A3A.4 Browse using GBrowse
Gene Graph