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RNAi Experiment: Cenix:334-e11 Ace View of Cenix:334-e11
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y54H5A.4
KOG Annotation  Nuclear architecture related protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:5155102..5156383)
Transcript overlap: 522 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 461
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.741
Wormbase (BLAST) RNAi primary
External "Y54H5A.4" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  Y54H5A.1
KOG Annotation  Ribosome Assembly protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (III:5155102..5156383)
Transcript overlap: 280 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 259
Relative score: 0.349 (Best raw score= for Gene )
Specificity index: 0.259
Wormbase (BLAST) RNAi primary
External "Y54H5A.1" Links  Wormbase NCBI Phenobank 1 2
Cenix:334-e11 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:334-e11 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:334-e11 (PCR_reagent)
Remark  wild type
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y54H5A.1 Browse using GBrowse
Gene Graph
Gene Plot of Y54H5A.4 Browse using GBrowse
Gene Graph