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RNAi Experiment: Cenix:335-b1 Ace View of Cenix:335-b1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C48B4.4 (ced-7)
Description of "C48B4.4"  The mutant phenotype of ced-7 is enhanced by mutation of ced-12.
KOG Annotation  Lipid exporter ABCA1 and related proteins, ABC superfamily
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:9575181..9576674)
Transcript overlap: 919 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 898
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.838
Wormbase (BLAST) RNAi primary
External "C48B4.4" Links  Wormbase NCBI Phenobank 1 2 3
Gene Inhibited  F59E11.3 (sri-23)
Evidence for Inhibition 
Sliding Window Raw score: 174
Relative score: 0.194 (Best raw score= for Gene )
Specificity index: 0.162
External "F59E11.3" Links  Wormbase NCBI Phenobank 1 2 3
Cenix:335-b1 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:335-b1 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:335-b1 (PCR_reagent)
Remark  wild type
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F59E11.3 Browse using GBrowse
Gene Graph
Gene Plot of C48B4.4 Browse using GBrowse
Gene Graph