Link to T22F7.4RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y52B11A.6Link to R06C1.5geneMap RNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to B0391.3RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to Y45G12B.2aLink to Y45G12B.2bLink to Y45G12B.1c.1Link to Y45G12B.1c.2Link to Y45G12B.1aLink to Y45G12B.1bRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: Cenix:335-b12 Ace View of Cenix:335-b12
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T22F7.4
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:526220..527901)
Transcript overlap: 528 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 465
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.448
Wormbase (BLAST) RNAi primary
External "T22F7.4" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  T24E12.7
Evidence for Inhibition 
Sliding Window Raw score: 147
Relative score: 0.316 (Best raw score= for Gene )
Specificity index: 0.142
External "T24E12.7" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  Y52B11A.6
Evidence for Inhibition 
Sliding Window Raw score: 85
Relative score: 0.183 (Best raw score= for Gene )
Specificity index: 0.082
External "Y52B11A.6" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F44C4.6
Evidence for Inhibition 
Sliding Window Raw score: 70
Relative score: 0.151 (Best raw score= for Gene )
Specificity index: 0.067
External "F44C4.6" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  B0391.2
Evidence for Inhibition 
Sliding Window Raw score: 71
Relative score: 0.153 (Best raw score= for Gene )
Specificity index: 0.068
External "B0391.2" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  R06C1.5
Evidence for Inhibition 
Sliding Window Raw score: 133
Relative score: 0.286 (Best raw score= for Gene )
Specificity index: 0.128
External "R06C1.5" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  Y45G12B.2
Description of "Y45G12B.2"  Associated GO Term : ubiquitin-protein ligase activity
KOG Annotation  Predicted E3 ubiquitin ligase
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 67
Relative score: 0.144 (Best raw score= for Gene )
Specificity index: 0.065
External "Y45G12B.2" Links  Wormbase NCBI Phenobank 1
Cenix:335-b12 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:335-b12 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:335-b12 (PCR_reagent)
Remark  wild type
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of T22F7.4 Browse using GBrowse
Gene Graph
Gene Plot of Y52B11A.6 Browse using GBrowse
Gene Graph
Gene Plot of T24E12.7 Browse using GBrowse
Gene Graph
Gene Plot of F44C4.6 Browse using GBrowse
Gene Graph
Gene Plot of R06C1.5 Browse using GBrowse
Gene Graph
Gene Plot of B0391.2 Browse using GBrowse
Gene Graph
Gene Plot of Y45G12B.2 Browse using GBrowse
Gene Graph