RNAi Experiment: Cenix:335-b6 |
Ace View of Cenix:335-b6
|
Genes Inhibited |
|
Gene Inhibited |
ZC47.7 |
Description of "ZC47.7" |
This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. |
Evidence for Inhibition |
ePCR |
Status: Best_ePCR (III:1266274..1267516)
Transcript overlap: 527 nt |
|
Sliding Window |
Raw score: 464
Relative score: 0.957 (Best raw score= for Gene )
Specificity index: 0.432 |
Wormbase (BLAST) |
RNAi primary |
|
External "ZC47.7" Links |
1 2 |
Gene Inhibited |
ZC47.6 |
Description of "ZC47.6" |
This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. |
Evidence for Inhibition |
ePCR |
Status: Bottom50_percentile_ePCR (III:1266274..1267516)
Transcript overlap: 124 nt |
|
Sliding Window |
Raw score: 124
Relative score: 0.256 (Best raw score= for Gene )
Specificity index: 0.116 |
Wormbase (BLAST) |
RNAi primary |
|
External "ZC47.6" Links |
1 2 |
Gene Inhibited |
Y119D3B.19 |
Description of "Y119D3B.19" |
This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. |
Evidence for Inhibition |
Sliding Window |
Raw score: 485
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.452 |
Wormbase (BLAST) |
RNAi primary |
|
External "Y119D3B.19" Links |
1 2 |
Cenix:335-b6 Phenotypes |
|
|
Phenotype |
WT
|
Cenix:335-b6 Experiment Details |
Ace View |
Laboratory |
TH |
RNAi Reagent & Type |
Cenix:335-b6 (PCR_reagent) |
Remark |
wild type |
Reference |
Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...." |
Delivery Method |
Injection |
Date |
2005-3-24 |
Gene Plot of ZC47.6 |
Browse using GBrowse
|
|
Gene Plot of Y119D3B.19 |
Browse using GBrowse
|
|
Gene Plot of ZC47.7 |
Browse using GBrowse
|
|