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RNAi Experiment: Cenix:335-h2 Ace View of Cenix:335-h2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  K03H1.2 (mog-1)
Description of "K03H1.2"  The mog-1 gene encodes a DEAH helicase orthologous to the Drosophila CG1375/1405, the human PRP16, and the S. cerevisiae PRP16 proteins.
KOG Annotation  mRNA splicing factor ATP-dependent RNA helicase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:9951212..9952911)
Transcript overlap: 670 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 607
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.554
Wormbase (BLAST) RNAi primary
External "K03H1.2" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  K03H1.11
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (III:9951212..9952911)
Transcript overlap: 531 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 489
Relative score: 0.806 (Best raw score= for Gene )
Specificity index: 0.446
Wormbase (BLAST) RNAi primary
External "K03H1.11" Links  Wormbase NCBI Phenobank 1 2
Cenix:335-h2 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  WT_postembryonic_morphology
External Movies 
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hosting these data.)
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Cenix:335-h2 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:335-h2 (PCR_reagent)
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of K03H1.11 Browse using GBrowse
Gene Graph
Gene Plot of K03H1.2 Browse using GBrowse
Gene Graph