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RNAi Experiment: Cenix:335-h5 Ace View of Cenix:335-h5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F40F12.1 (sdz-17)
Description of "F40F12.1"  Associated GO Term : molecular_function unknown
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:9916319..9917284)
Transcript overlap: 192 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 94
Relative score: 0.614 (Best raw score= for Gene )
Specificity index: 0.193
Wormbase (BLAST) RNAi primary
External "F40F12.1" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  K07E8.4
Evidence for Inhibition 
Sliding Window Raw score: 153
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.314
External "K07E8.4" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  C08A9.2
Evidence for Inhibition 
Sliding Window Raw score: 106
Relative score: 0.693 (Best raw score= for Gene )
Specificity index: 0.217
External "C08A9.2" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  K03H1.3
Description of "K03H1.3"  Associated GO Term : molecular_function unknown
Evidence for Inhibition 
Sliding Window Raw score: 135
Relative score: 0.882 (Best raw score= for Gene )
Specificity index: 0.277
Wormbase (BLAST) RNAi primary
External "K03H1.3" Links  Wormbase NCBI Phenobank 1 2
Cenix:335-h5 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:335-h5 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:335-h5 (PCR_reagent)
Remark  early embryonic: No signficant defects.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of K07E8.4 Browse using GBrowse
Gene Graph
Gene Plot of C08A9.2 Browse using GBrowse
Gene Graph
Gene Plot of F40F12.1 Browse using GBrowse
Gene Graph
Gene Plot of K03H1.3 Browse using GBrowse
Gene Graph