Link to K08A2.5b.2Link to K08A2.5c.2Link to K08A2.5a.3Link to K08A2.5a.1Link to K08A2.5a.2Link to K08A2.5b.1Link to K08A2.5c.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to T04A11.11Link to ZC239.1geneMap RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to T04A11.11Link to K08A2.5b.1Link to K08A2.5b.2geneMap RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to ZC239.1Link to K08A2.5b.1Link to K08A2.5b.2geneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Cenix:336-a5 Ace View of Cenix:336-a5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  K08A2.5 (nhr-88)
Description of "K08A2.5"  Associated GO Term : transcription factor activity
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (II:2980663..2982126)
Transcript overlap: 783 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 697
Relative score: 0.077 (Best raw score= for Gene )
Specificity index: 0.038
Wormbase (BLAST) RNAi primary
External "K08A2.5" Links  Wormbase NCBI Phenobank 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18
Gene Inhibited  ZC239.1
Evidence for Inhibition 
Sliding Window Raw score: 874
Relative score: 0.975 (Best raw score= for Gene )
Specificity index: 0.475
Wormbase (BLAST) RNAi primary
External "ZC239.1" Links  Wormbase NCBI Phenobank 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18
Gene Inhibited  T04A11.11
Evidence for Inhibition 
Sliding Window Raw score: 896
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.487
Wormbase (BLAST) RNAi primary
External "T04A11.11" Links  Wormbase NCBI Phenobank 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18
Cenix:336-a5 Phenotypes Help with Phenotypes
Phenotype  WT
External Movies 
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hosting these data.)
/static/images/movie.gif /static/images/movie.gif /static/images/movie.gif
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Cenix:336-a5 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:336-a5 (PCR_reagent)
Remark  wild type
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of ZC239.1 Browse using GBrowse
Gene Graph
Gene Plot of T04A11.11 Browse using GBrowse
Gene Graph
Gene Plot of K08A2.5 Browse using GBrowse
Gene Graph