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RNAi Experiment: Cenix:337-a10 Ace View of Cenix:337-a10
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T28D6.6
Description of "T28D6.6"  Associated GO Term : GTP binding
KOG Annotation  GTP-binding protein DRG1 (ODN superfamily)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:11342407..11343387)
Transcript overlap: 235 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 172
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "T28D6.6" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  T28D6.9 (pen-2)
KOG Annotation  Predicted membrane protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (III:11342407..11343387)
Transcript overlap: 88 nt
Explain types of evidence for RNAi inhibition
Wormbase (BLAST) RNAi primary
External "T28D6.9" Links  Wormbase NCBI Phenobank 1 2
Cenix:337-a10 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:337-a10 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:337-a10 (PCR_reagent)
Remark  early embryonic: No significant defects.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of T28D6.9 Browse using GBrowse
Gene Graph
Gene Plot of T28D6.6 Browse using GBrowse
Gene Graph