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RNAi Experiment: Cenix:337-a11 Ace View of Cenix:337-a11
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y111B2A.22 (ssl-1)
Description of "Y111B2A.22"  The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77)
KOG Annotation  SNF2 family DNA-dependent ATPase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:12725889..12728068)
Transcript overlap: 965 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 902
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y111B2A.22" Links  Wormbase NCBI Phenobank 1
Cenix:337-a11 Phenotypes Help with Phenotypes
Phenotype  WT
External Movies 
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Cenix:337-a11 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:337-a11 (PCR_reagent)
Remark  wild type
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y111B2A.22 Browse using GBrowse
Gene Graph