Link to Y56A3A.21.1Link to Y56A3A.21.2Link to Y56A3A.22RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to Y56A3A.21.2Link to Y56A3A.21.1Link to Y56A3A.22Link to Y56A3A.13RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Cenix:338-a9 Ace View of Cenix:338-a9
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y56A3A.21
Description of "Y56A3A.21"  Associated GO Term : endoplasmic reticulum
KOG Annotation  Translocon-associated complex TRAP, delta subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:11920951..11921626)
Transcript overlap: 494 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 452
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y56A3A.21" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  Y56A3A.22
KOG Annotation  Uncharacterized conserved protein
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 59 nt Explain types of evidence for RNAi inhibition
Wormbase (BLAST) RNAi primary
External "Y56A3A.22" Links  Wormbase NCBI Phenobank 1 2
Cenix:338-a9 Phenotypes Help with Phenotypes
Phenotype  WT
External Movies 
(Please note that RNAiDB is not
hosting these data.)
/static/images/movie.gif /static/images/movie.gif
Help
Cenix:338-a9 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:338-a9 (PCR_reagent)
Remark  wild type
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y56A3A.21 Browse using GBrowse
Gene Graph
Gene Plot of Y56A3A.22 Browse using GBrowse
Gene Graph