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RNAi Experiment: Cenix:341-d12 Ace View of Cenix:341-d12
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y49E10.1 (rpt-6)
Description of "Y49E10.1"  rpt-6 encodes a triple A ATPase that is a subunit of the 26S proteasome 19S regulatory particle (RP) base subcomplex; RPT-6 is required for embryonic and larval development and by homology, is predicted to function in unfolding protein substrates and translocating them into the core proteolytic particle (CP) of the proteasome.
KOG Annotation  26S proteasome regulatory complex, ATPase RPT6
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:12370337..12370819)
Transcript overlap: 431 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 389
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y49E10.1" Links  Wormbase NCBI Phenobank 1
Cenix:341-d12 Phenotypes Help with Phenotypes
Phenotype  Larval Lethal-Early (L1/L2)
External Movies 
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Cenix:341-d12 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:341-d12 (PCR_reagent)
Remark  post-embryonic: Larval Lethal-Early (L1/L2)
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y49E10.1 Browse using GBrowse
Gene Graph