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RNAi Experiment: Cenix:37-f2 Ace View of Cenix:37-f2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T03E6.7 (cpl-1)
Description of "T03E6.7"  cpl-1 encodes a member of the cathepsin L-like cysteine protease family required for embryonic viability and normal growth; expressed in eggshells and throughout early embryos, accumulates in intestinal cells during late embryogenesis, and expressed in the cuticle, gonad, and pharynx later in development.
KOG Annotation  Cysteine proteinase Cathepsin L
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:16595273..16596545)
Transcript overlap: 705 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 663
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.82
Wormbase (BLAST) RNAi primary
External "T03E6.7" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  Y22D7AR.1
Description of "Y22D7AR.1"  Associated GO Term : protein tyrosine phosphatase activity
KOG Annotation  Protein tyrosine phosphatase
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 146
Relative score: 0.22 (Best raw score= for Gene )
Specificity index: 0.18
External "Y22D7AR.1" Links  Wormbase NCBI Phenobank 1
Cenix:37-f2 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  WT_postembryonic_morphology
External Movies 
(Please note that RNAiDB is not
hosting these data.)
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Help
Cenix:37-f2 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:37-f2 (PCR_reagent)
Remark  early embryonic: No reproducible defects.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of T03E6.7 Browse using GBrowse
Gene Graph
Gene Plot of Y22D7AR.1 Browse using GBrowse
Gene Graph