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RNAi Experiment: Cenix:40-b12 Ace View of Cenix:40-b12
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F36A4.7 (ama-1)
Description of "F36A4.7"  ama-1 encodes the large subunit of RNA polymerase II required for mRNA transcription; AMA-1 is essential for proper embryonic development, particularly for the early division and migration of the endodermal precursor (E) cells that initiate gastrulation; AMA-1 is expressed ubiquitously in the developing embryo until the 550-cell stage.
KOG Annotation  RNA polymerase II, large subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:4254806..4255375)
Transcript overlap: 570 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 549
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F36A4.7" Links  Wormbase NCBI Phenobank 1
Cenix:40-b12 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  Spindle Elongation/Integrity abnormal
External Movies 
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Cenix:40-b12 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:40-b12 (PCR_reagent)
Remark  early embryonic: Spindle Elongation/Integrity
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F36A4.7 Browse using GBrowse
Gene Graph