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RNAi Experiment: Cenix:46-d8 Ace View of Cenix:46-d8
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C55A6.9
KOG Annotation  Putative RNA polymerase II regulator
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:11523856..11525554)
Transcript overlap: 1077 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 972
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.842
Wormbase (BLAST) RNAi primary
External "C55A6.9" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  C55A6.11
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (V:11523856..11525554)
Transcript overlap: 224 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 182
Relative score: 0.187 (Best raw score= for Gene )
Specificity index: 0.158
Wormbase (BLAST) RNAi primary
External "C55A6.11" Links  Wormbase NCBI Phenobank 1
Cenix:46-d8 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  WT_postembryonic_morphology
External Movies 
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Cenix:46-d8 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:46-d8 (PCR_reagent)
Remark  early embryonic: No significant defects seen in any of the recordings.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of C55A6.11 Browse using GBrowse
Gene Graph
Gene Plot of C55A6.9 Browse using GBrowse
Gene Graph