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RNAi Experiment: Cenix:48-e3 Ace View of Cenix:48-e3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C08F8.1
KOG Annotation  Molecular chaperone Prefoldin, subunit 1
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (IV:11149786..11151058)
Transcript overlap: 465 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 402
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.854
Wormbase (BLAST) RNAi primary
External "C08F8.1" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  C08F8.2
Description of "C08F8.2"  Associated GO Term : nucleic acid binding
KOG Annotation  Mitochondrial RNA helicase SUV3, DEAD-box superfamily
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (IV:11149786..11151058)
Transcript overlap: 90 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 69
Relative score: 0.172 (Best raw score= for Gene )
Specificity index: 0.146
Wormbase (BLAST) RNAi primary
External "C08F8.2" Links  Wormbase NCBI Phenobank 1 2
Cenix:48-e3 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:48-e3 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:48-e3 (PCR_reagent)
Remark  3/3 tests are wildtype.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of C08F8.1 Browse using GBrowse
Gene Graph
Gene Plot of C08F8.2 Browse using GBrowse
Gene Graph