Link to W02F12.3Link to W02F12.4aLink to W02F12.4bLink to W02F12.4cRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to W02F12.4cLink to W02F12.4bLink to W02F12.4aLink to W02F12.5.3Link to W02F12.5.2Link to W02F12.5.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Cenix:53-b4 Ace View of Cenix:53-b4
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  W02F12.4
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:6708789..6709588)
Transcript overlap: 580 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 427
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "W02F12.4" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  W02F12.5
Description of "W02F12.5"  This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial.
KOG Annotation  Dihydrolipoamide succinyltransferase (2-oxoglutarate dehydrogenase, E2 subunit)
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 8 nt Explain types of evidence for RNAi inhibition
External "W02F12.5" Links  Wormbase NCBI Phenobank 1
Cenix:53-b4 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:53-b4 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:53-b4 (PCR_reagent)
Remark  3/3 tests give wildtype results.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of W02F12.4 Browse using GBrowse
Gene Graph
Gene Plot of W02F12.5 Browse using GBrowse
Gene Graph