Link to CC4.3.2Link to CC4.3.1Link to CC4.3.3Link to ZK256.1a.1Link to ZK256.1a.2Link to ZK256.1cLink to ZK256.1bRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
RNAi Experiment: Cenix:55-f1 Ace View of Cenix:55-f1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  ZK256.1 (pmr-1)
Description of "ZK256.1"  The pmr-1 gene encodes a Golgi P-type ATPase Ca^2+/Mn^2+-pump; mutations in its human ortholog, ATP2C1, cause Hailey-Hailey disease (OMIM:169600).
KOG Annotation  Ca2+ transporting ATPase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:13015139..13015693)
Transcript overlap: 547 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 526
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "ZK256.1" Links  Wormbase NCBI Phenobank 1
Cenix:55-f1 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:55-f1 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:55-f1 (PCR_reagent)
Remark  3/3 tests are wildtype.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of ZK256.1 Browse using GBrowse
Gene Graph