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RNAi Experiment: Cenix:57-a6 Ace View of Cenix:57-a6
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  K08D12.1 (pbs-1)
Description of "K08D12.1"  pbs-1 encodes a protease subunit with highest similarity to vertebrate proteasome subunit beta type 6 that affects fertility, embryonic viability, locomotion, and larval viability
KOG Annotation  20S proteasome, regulatory subunit beta type PSMB6/PSMB9/PRE3
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:1708858..1709514)
Transcript overlap: 592 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 550
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "K08D12.1" Links  Wormbase NCBI Phenobank 1
Cenix:57-a6 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  Passage Through Meiosis defective
External Movies 
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hosting these data.)
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Cenix:57-a6 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:57-a6 (PCR_reagent)
Remark  early embryonic: Passage Through Meiosis
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of K08D12.1 Browse using GBrowse
Gene Graph