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RNAi Experiment: Cenix:65-e11 Ace View of Cenix:65-e11
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y57A10A.11 (rol-1)
Description of "Y57A10A.11"  rol-1 encodes a nematode cuticular collagen required for normal body morphology at the adult stage of development; rol-1 expression is under the control of the heterochronic pathway, as heterochronic mutants that synthesize adult cuticle early produce animals that roll as larvae, while heterochronic mutants that fail to execute normal adult development never display the roller phenotype.
KOG Annotation  Collagens (type IV and type XIII), and related proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:12175188..12175916)
Transcript overlap: 729 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 708
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y57A10A.11" Links  Wormbase NCBI Phenobank 1
Cenix:65-e11 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:65-e11 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:65-e11 (PCR_reagent)
Remark  3/3 tests are wildtype.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y57A10A.11 Browse using GBrowse
Gene Graph