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RNAi Experiment: Cenix:71-e2 Ace View of Cenix:71-e2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C09H6.2 (lin-10)
Description of "C09H6.2"  The lin-10 gene encodes a PDZ and PTB domain-containing protein that is homologous to mammalian Munc interacting proteins (Mint1, OMIM:602414) and is required for polarized protein localization; LIN-10 is required for proper localization of the LET-23 EGF receptor to the basolateral membrane of the vulval precursor cells and for proper postsynaptic localization of GLR-1, an AMPA-type glutamate receptor in interneurons; LIN-10 is detected in the cytoplasm, membrane, and at particularly high levels in the Golgi.
KOG Annotation  Beta amyloid precursor-binding protein
PDZ domain
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:8114300..8114959)
Transcript overlap: 503 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 482
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C09H6.2" Links  Wormbase NCBI Phenobank 1 2
Cenix:71-e2 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:71-e2 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:71-e2 (PCR_reagent)
Remark  3/3 tests are wt
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of C09H6.2 Browse using GBrowse
Gene Graph