| RNAi Experiment: Cenix:76-d7 |
Ace View of Cenix:76-d7
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| Genes Inhibited |
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| Gene Inhibited |
Y111B2A.18 (rsp-3) |
| Description of "Y111B2A.18" |
rsp-3 encodes a putative ortholog of human SF2/ASF and member of the SR protein family of nuclear phosphoproteins that are required for constitutive splicing and influence alternative splicing regulation; rsp-3 affects the development of oocytes together with rsr-1, and is required for late embryonic viability; SPK-1 binds directly to and phosphorylates the RS domain of RSP-3 in vitro and the mRNA of rsp-3 is predominantly expressed in the germline. |
| KOG Annotation |
Alternative splicing factor ASF/SF2 (RRM superfamily)
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| Evidence for Inhibition |
| ePCR |
Status: Unique_ePCR (III:12686970..12687664)
Transcript overlap: 582 nt |
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| Sliding Window |
Raw score: 519
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene) |
| Wormbase (BLAST) |
RNAi primary |
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| External "Y111B2A.18" Links |
   1 |
| Cenix:76-d7 Phenotypes |
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| Embryonic |
Emb Penetrance None reported |
| Phenotype |
WT_postembryonic_morphology
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External Movies
(Please note that RNAiDB is not
hosting these data.) |
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| Cenix:76-d7 Experiment Details |
Ace View |
| Laboratory |
TH |
| RNAi Reagent & Type |
Cenix:76-d7 (PCR_reagent) |
| Remark |
early embryonic: Clear-cut result. |
| Reference |
Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...." |
| Delivery Method |
Injection |
| Date |
2005-3-24 |
| Gene Plot of Y111B2A.18 |
Browse using GBrowse
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