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RNAi Experiment: Cenix:77-e3 Ace View of Cenix:77-e3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y71F9AL.13 (rpl-1)
Description of "Y71F9AL.13"  rpl-1 encodes a large ribosomal subunit L10a protein; by homology, RPL-1 is predicted to function in protein biosynthesis; in C. elegans, RPL-1 activity is essential for embryonic development.
KOG Annotation  60S ribosomal protein L10A
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:2875451..2876185)
Transcript overlap: 639 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 555
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y71F9AL.13" Links  Wormbase NCBI Phenobank 1 2
Cenix:77-e3 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  Osmotic Integrity defective
External Movies 
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Cenix:77-e3 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:77-e3 (PCR_reagent)
Remark  early embryonic: Osmotic Integrity
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y71F9AL.13 Browse using GBrowse
Gene Graph