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RNAi Experiment: Cenix:83-a1 Ace View of Cenix:83-a1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  B0218.3 (pmk-1)
Description of "B0218.3"  pmk-1 encodes a mitogen-activated protein kinase (MAPK), orthologous to human p38 MAPK (OMIM:600289), that is required for eliciting gonadal programmed cell death in response to Salmonella enterica infection; PMK-1 lies upstream of CED-9, a negative regulator of apoptosis, in the programmed cell death pathway.
KOG Annotation  Mitogen-activated protein kinase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:8149448..8150830)
Transcript overlap: 517 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 454
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "B0218.3" Links  Wormbase NCBI Phenobank 1
Cenix:83-a1 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:83-a1 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:83-a1 (PCR_reagent)
Remark  3/3 test with wildtype results.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of B0218.3 Browse using GBrowse
Gene Graph