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RNAi Experiment: Cenix:86-a5 Ace View of Cenix:86-a5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F46F11.2 (cey-2)
Description of "F46F11.2"  cey-2 encodes a cold-shock/Y-box domain-containing protein; by homology, CEY-2 is predicted to function as either an RNA-binding protein involved in translation or RNA processing, or a DNA-binding protein involved in transcriptional regulation; cey-2 mRNA is expressed maternally in the early embryo, in a pattern characteristic of class II maternal RNAs, which are initially detected throughout the embryo but restricted to the P, or germline, lineage as cell division progresses; as loss of cey-2 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of cey-2 in C. elegans development and/or behavior is not yet known.
KOG Annotation  Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:5619325..5620634)
Transcript overlap: 975 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 912
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F46F11.2" Links  Wormbase NCBI Phenobank 1
Cenix:86-a5 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:86-a5 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:86-a5 (PCR_reagent)
Remark  3 out of 3 tests are wildtype.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F46F11.2 Browse using GBrowse
Gene Graph