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RNAi Experiment: Cenix:88-g1 Ace View of Cenix:88-g1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  R09B3.4 (ubc-12)
Description of "R09B3.4"  The ubc-12 gene encodes a ubiquitin-conjugating enzyme whose substrate is NED-8, and which is required for both embryogenesis and terminal hypodermal differentiation; ubc-12(RNAi) mutants either arrest during embryonic development or show pleotropic defects (e.g., vulval eversion during the L4 stage), as well as defective alae.
KOG Annotation  Ubiquitin-protein ligase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:11911265..11911925)
Transcript overlap: 565 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 523
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "R09B3.4" Links  Wormbase NCBI Phenobank 1
Cenix:88-g1 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  Cyk
External Movies 
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Cenix:88-g1 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:88-g1 (PCR_reagent)
Remark  early embryonic: Cytokinesis
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of R09B3.4 Browse using GBrowse
Gene Graph