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RNAi Experiment: Cenix:90-b4 Ace View of Cenix:90-b4
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y110A7A.13 (chp-1)
Description of "Y110A7A.13"  chp-1 encodes a protein containing two CHORD domains that is required for embryonic polarity, germline development, and vulval development.
KOG Annotation  Zn2+-binding protein Melusin/RAR1, contains CHORD domain
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:5103737..5104771)
Transcript overlap: 940 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 877
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y110A7A.13" Links  Wormbase NCBI Phenobank 1
Cenix:90-b4 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  WT_postembryonic_morphology
External Movies 
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Cenix:90-b4 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:90-b4 (PCR_reagent)
Remark  early embryonic: No significant defects.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y110A7A.13 Browse using GBrowse
Gene Graph