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RNAi Experiment: Cenix:90-g11 Ace View of Cenix:90-g11
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y47G6A.20 (rnp-6)
Description of "Y47G6A.20"  rnp-6 encodes an ortholog of HALF-PINT in D. melanogaster and FBP Interacting Repressor (FIR)/PUF60 in mammals, predicted to be involved in mRNA splicing regulation, mRNA localization, or transcriptional regulation via TFIIH.
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:3545787..3546898)
Transcript overlap: 615 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 531
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y47G6A.20" Links  Wormbase NCBI Phenobank 1 2 3
Cenix:90-g11 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  WT_postembryonic_morphology
External Movies 
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Cenix:90-g11 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:90-g11 (PCR_reagent)
Remark  early embryonic: No significant defects.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y47G6A.20 Browse using GBrowse
Gene Graph