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RNAi Experiment: Cenix:99-d12 Ace View of Cenix:99-d12
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y116A8C.29
Evidence for Inhibition 
ePCR Status: Best_ePCR (IV:17093848..17095429)
Transcript overlap: 261 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 177
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.673
Wormbase (BLAST) RNAi primary
External "Y116A8C.29" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  Y116A8C.27
KOG Annotation  F1-ATP synthase assembly protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (IV:17093848..17095429)
Transcript overlap: 105 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 86
Relative score: 0.486 (Best raw score= for Gene )
Specificity index: 0.327
Wormbase (BLAST) RNAi primary
External "Y116A8C.27" Links  Wormbase NCBI Phenobank 1
Cenix:99-d12 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:99-d12 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:99-d12 (PCR_reagent)
Remark  3 out of 3 tests are wildtype.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y116A8C.27 Browse using GBrowse
Gene Graph
Gene Plot of Y116A8C.29 Browse using GBrowse
Gene Graph